Get analysis data for a transcriptome dataset — get_analysis_data • unitcm

Retrieve data for a specific analysis module. Return type varies by module.

Usage

get_analysis_data(dataset_id, module, gene = NULL)

Arguments

dataset_id: The dataset ID.
module: Analysis module name. One of: "meta", "expression", "deg", "go", "kegg", "gsea", "ppi", "immune", "tf", "pca", "qc".
gene: Optional gene filter (for expression module only).

Value

A tibble::tibble() for tabular modules (deg, go, kegg, gsea, immune, tf), or a named list for structured modules (meta, expression, ppi, pca, qc).

Examples

if (FALSE) { # \dontrun{
get_analysis_data("TCMtrans00001", "deg")
get_analysis_data("TCMtrans00001", "expression", gene = "TP53")
} # }