Compare gene-disease sources (MIDAS)

Compare how different evidence sources cover a gene list, producing Venn-diagram-ready set data.

Usage

query_source_comparison(
  gene_list,
  sources = NULL,
  mode = c("union", "intersection")
)

Arguments

gene_list

Character vector of gene identifiers.

sources

Character vector of source databases (or NULL).

mode

Comparison mode: "union" (default) or "intersection".

Value

A named list with elements: $mode, $sources, $sets (named list of gene vectors), $intersections, $exclusives, $genes_used.

Examples

if (FALSE) { # \dontrun{
query_source_comparison(c("TP53", "BRCA1"), mode = "union")
} # }