Search DrugCLIP predicted compound-target interactions — search_target2np_drugclip • unitcm

Query DrugCLIP deep-learning predictions, with optional confidence filtering by predicted score.

Usage

search_target2np_drugclip(
  search = NULL,
  search_field = c("all", "gene_symbol", "compound_name", "inchikey"),
  search_mode = c("exact", "fuzzy"),
  min_score = NULL,
  confidence = NULL,
  page = 1L,
  page_size = 20L,
  all_pages = FALSE
)

Arguments

search: Free-text search.
search_field: One of "all", "gene_symbol", "compound_name", or "inchikey".
search_mode: "exact" or "fuzzy".
min_score: Minimum DrugCLIP score (0-1).
confidence: One of "high" (>= 0.8), "medium" (0.5-0.8), "low" (< 0.5).
page, page_size: Pagination.
all_pages: If TRUE, fetch all pages.

Value

A tibble::tibble() of DrugCLIP predictions with attribute "total".

Examples

if (FALSE) { # \dontrun{
search_target2np_drugclip(search = "quercetin", confidence = "high")
} # }