Search transcriptome datasets — search

Query the TCM Transcriptome Hub. This endpoint uses Style-B pagination (count/results instead of total/items).

Usage

search_transcriptomes(
  search = NULL,
  tcm_classification = NULL,
  organism = NULL,
  model_type = NULL,
  experiment_type = NULL,
  disease_classification = NULL,
  cell_line = NULL,
  comparison_type = NULL,
  confidence = NULL,
  sequence_type = NULL,
  page = 1L,
  page_size = 20L,
  all_pages = FALSE
)

Arguments

search: Optional text search query.
tcm_classification: TCM classification filter.
organism: Organism filter.
model_type: Model type filter.
experiment_type: Experiment type filter.
disease_classification: Disease classification filter.
cell_line: Cell line filter.
comparison_type: Comparison type filter.
confidence: Confidence filter.
sequence_type: Sequence type filter.
page: Page number (default 1).
page_size: Results per page (default 20).
all_pages: If TRUE, fetch all pages via auto-pagination.

Value

A tibble::tibble() of datasets with attribute "total".

Examples

if (FALSE) { # \dontrun{
search_transcriptomes(search = "ginseng")
} # }